Image |
Bib Reference |
Publication Type |
2023 |
|
Johannes Eschner, Peter Mindek, Manuela Waldner
Illustrative Motion Smoothing for Attention Guidance in Dynamic Visualizations
Computer Graphics Forum, 42(3):361-372, June 2023. [paper] [video] |
Journal Paper with Conference Talk |
2022 |
|
Johannes Eschner
Generating Molecular Motion Blur Videos for a User Study
[project report] |
Student Project |
|
Pavol Ulbrich, Manuela Waldner, Katarína Furmanová, Sergio M. Margues, David Bednář, Barbora Kozlikova, Jan Byska
sMolBoxes: Dataflow Model for Molecular Dynamics Exploration
IEEE Transactions on Visualization and Computer Graphics:1-10, October 2022. [arxiv] |
Journal Paper with Conference Talk |
2021 |
|
Ruwayda Alharbi, Ondrej Strnad, Laura R. Luidolt, Manuela Waldner, David Kouřil, Ciril Bohak, Tobias Klein, Eduard Gröller, Ivan Viola
Nanotilus: Generator of Immersive Guided-Tours in Crowded 3D Environments
IEEE Transactions on Visualization and Computer Graphics:1-16, December 2021. [Image] [Paper] |
Journal Paper (without talk) |
|
David Kouřil, Ondrej Strnad, Peter Mindek, Sarkis Halladjian, Tobias Isenberg, Eduard Gröller, Ivan Viola
Molecumentary: Adaptable Narrated Documentaries Using Molecular Visualization
IEEE Transactions on Visualization and Computer Graphics, 1:1-1, November 2021. |
Journal Paper with Conference Talk |
|
David Kouřil
Interactive Visualization of Dense and Multi-Scale Data for Science Outreach
Supervisor: Ivan Viola
Duration: March 2017 — April 2021
[teaser] [thesis] |
PhD-Thesis |
|
Sarkis Halladjian, David Kouřil, Haichao Miao, Eduard Gröller, Ivan Viola, Tobias Isenberg
Multiscale Unfolding: Illustratively Visualizing the Whole Genome at a Glance
IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS , 3:1-13, March 2021. [Image] [Paper] |
Journal Paper (without talk) |
|
Henry Ehlers
Unknown
Supervisor: Renata Raidou
Duration: 2021 — 2024
|
Ongoing PhD-Thesis |
2020 |
|
Hsiang-Yun Wu, Martin Nöllenburg, Ivan Viola
Multi-level Area Balancing of Clustered Graphs
IEEE Transactions on Visualization and Computer Graphics (TVCG), x:1-15, November 2020. [paper] [video] |
Journal Paper (without talk) |
|
Ladislav Čmolík, Václav Pavlovec, Hsiang-Yun Wu, Martin Nöllenburg
Mixed Labeling: Integrating Internal and External Labels
IEEE Transactions on Visualization and Computer Graphics (TVCG), x:1-14, September 2020. [image] [paper] |
Journal Paper (without talk) |
|
Milena Nowak
Hierarchical Multi-resolution Data Structure for Molecular Visualization
[Image] [Master Thesis] |
Master Thesis |
|
Elisa De Llano, Haichao Miao, Yasaman Ahmadi, Armanda J Wilson, Morgan Beeby, Ivan Viola, Ivan Barisic
Adenita: interactive 3D modelling and visualization of DNA nanostructures
Nucleic Acids Research, July 2020. |
Journal Paper (without talk) |
|
Renata Raidou, Barbora Kozlikova, Johanna Beyer, Timo Ropinski, Issei Fujishiro
NII Shonan Meeting Report No. 167: Formalizing Biological and Medical Visualization
ISSN 2186-7437
|
Miscellaneous Publication |
|
Sarkis Halladjian, Haichao Miao, David Kouřil, Eduard Gröller, Ivan Viola, Tobias Isenberg
ScaleTrotter: Illustrative Visual Travels Across Negative Scales
IEEE Transactions on Visualization and Computer Graphics, 26(1), January 2020. [paper] |
Journal Paper with Conference Talk |
|
Ngan Nguyen, Ondrej Strnad, Tobias Klein, Ruwayda Alharbi, Peter Wonka, Martina Maritan, Peter Mindek, Ludovic Autin, David Goodsell, Ivan Viola
Modeling in the Time of COVID-19: Statistical and Rule-based Mesoscale Models
IEEE Transactions on Visualization and Computer Graphics, 2020. |
Journal Paper with Conference Talk |
2019 |
|
Tobias Klein
Instant Construction of Atomistic Models for Visualization in Integrative Cell Biology
Supervisor: Ivan Viola
Duration: 2016 — 2019
[image] |
PhD-Thesis |
|
Tobias Klein, Peter Mindek, Ludovic Autin, David Goodsell, Arthur Olson, Eduard Gröller, Ivan Viola
Parallel Generation and Visualization of Bacterial Genome Structures
Computer Graphics Forum, 38(7):57-68, November 2019. |
Journal Paper with Conference Talk |
|
Hsiang-Yun Wu, Martin Nöllenburg, Ivan Viola
Graph Models for Biological Pathway Visualization: State of the Art and Future Challenges,
20. October 2019, Vis 2019 Workshop, Canada
[paper] |
WorkshopTalk |
|
Susanne Rinortner
Visualizing Protein Interactions in Corresponding Compartments
|
Bachelor Thesis |
|
Aleksandr Amirkhanov, Ilona Kosiuk, Peter Szmolyan, Artem Amirkhanov, Gabriel Mistelbauer, Eduard Gröller, Renata Raidou
ManyLands: A Journey Across 4D Phase Space of Trajectories
Computer Graphics Forum, 38(7):191-202, October 2019. [Paper] [Video demo] |
Journal Paper with Conference Talk |
|
Hsiang-Yun Wu, Martin Nöllenburg, Ivan Viola
Map of Metabolic Harmony
[image-full] |
Unknown Publication |
|
Maximilian Sbardellati, Haichao Miao, Hsiang-Yun Wu, Eduard Gröller, Ivan Barisic, Ivan Viola
Interactive Exploded Views for Molecular Structures
In Proceedings of the 9th Eurographics Workshop on Visual Computing for Biology and Medicine, pages 103-112. September 2019.
[paper] |
Conference Paper |
|
Haichao Miao
Geometric Abstraction for Effective Visualization and Modeling
Supervisor: Ivan Viola
|
PhD-Thesis |
|
Tobias Klein, Ivan Viola, Eduard Gröller, Peter Mindek
Multi-Scale Procedural Animations of Microtubule Dynamics Based on Measured Data
IEEE Transactions on Visualization and Computer Graphics, 26(1):622-632, August 2019. [paper] |
Journal Paper with Conference Talk |
|
Renata Raidou
Visual Analytics for the Representation, Exploration and Analysis of High-Dimensional, Multi-Faceted Medical Data
In Biomedical Visualisation, pages 137-162, July 2019
|
Article in a Book |
|
Jan Byska, Thomas Trautner, Sergio Marques, Jiri Damborsky, Barbora Kozlikova, Manuela Waldner
Analysis of Long Molecular Dynamics Simulations Using Interactive Focus+Context Visualization
Computer Graphics Forum, 38(3):441-453, June 2019. [paper] [video] |
Journal Paper with Conference Talk |
|
Haichao Miao, Elisa De Llano, Ivan Viola, Ivan Barisic
Interactive Visual Analysis for the Design of DNA Nanostructures
Poster shown at NANTECH 2019 – Nucleic Acid Nanotechnology: From Algorithmic Design to Biochemical Applications – Espoo, Finland
(27. May 2019-29. May 2019)
|
Poster |
|
Hsiang-Yun Wu, Martin Nöllenburg, Filipa L. Sousa, Ivan Viola
Metabopolis: Scalable Network Layout for Biological Pathway Diagrams in Urban Map Style
BMC Bioinformatics, 20(187):1-20, May 2019. [paper] [video] |
Journal Paper (without talk) |
|
Hsiang-Yun Wu, Haichao Miao, Ivan Viola
From Cells to Atoms - Biological Information Visualization (in Chinese)
TR-193-02-2019-1, March 2019 [paper] |
Technical Report |
|
Nicholas Waldin, Manuela Waldner, Mathieu Le Muzic, Eduard Gröller, David Goodsell, Ludovic Autin, Arthur Olson, Ivan Viola
Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations
Computer Graphics Forum, 38(6):150-164, March 2019. [Open Access Article in Wiley Online Library] |
Journal Paper (without talk) |
|
Felix Kugler
Profiling and Optimization of Large Biomolecular Scenes
[image] [thesis] |
Bachelor Thesis |
|
Katharina Unger
Visual Comparison of Organism-Specific Metabolic Pathways
[CESCG paper] |
Student Project |
|
Johannes Weissenböck, Bernhard Fröhler, Eduard Gröller, Johann Kastner, Christoph Heinzl
Dynamic Volume Lines: Visual Comparison of 3D Volumes through Space-filling Curves
IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS, 25(1):1040-1049, January 2019. [image] |
Journal Paper (without talk) |
|
Haichao Miao, Tobias Klein, David Kouřil, Peter Mindek, Karsten Schatz, Eduard Gröller, Barbora Kozlikova, Tobias Isenberg, Ivan Viola
Multiscale Molecular Visualization
Journal of Molecular Biology, 6(31):1049-1070, January 2019. [Paper] |
Journal Paper (without talk) |
|
Aleksandr Amirkhanov, Ilona Kosiuk, Peter Szmolyan, Artem Amirkhanov, Gabriel Mistelbauer, Eduard Gröller, Renata Raidou
EG VCBM 2019 Image Contest Award, people's choice—ManyLands: A Journey Across 4D Phase Space of Biological Systems
|
Unknown Publication |
2018 |
|
Peter Mindek
Molecular Visualization,
10. November 2018, FYI: Informationsdesign Konferenz Wien, Nordbahn-Halle, Vienna
|
WorkshopTalk |
|
Maximilian Sbardellati
Interactive Exploded Views for Presenting DNA Nano-Structures
[image] |
Bachelor Thesis |
|
Thomas Trautner
Importance-Driven Exploration of Molecular Dynamics Simulations
[image] [Poster] |
Master Thesis |
|
Nicolas Grossmann, Thomas Köppel, Eduard Gröller, Renata Raidou
VisualFlatter - Visual Analysis of Distortions in the Projection of Biomedical Structures
Eurographics Proceedings, September 2018. |
Journal Paper with Conference Talk |
|
Elisa De Llano, Haichao Miao, Tobias Isenberg, Eduard Gröller, Ivan Viola, Ivan Barisic
A Preview to Adenita: Visualization and Modeling of DNA Nanostructures
Poster shown at 3rd Functional DNA Nanotechnology Workshop
( 6. June 2018- 8. June 2018)
|
Poster |
|
Haichao Miao, Elisa De Llano, Tobias Isenberg, Eduard Gröller, Ivan Barisic, Ivan Viola
DimSUM: Dimension and Scale Unifying Maps for Visual Abstraction of DNA Origami Structures
Computer Graphics Forum, 37(3), June 2018. [Paper] |
Journal Paper with Conference Talk |
|
Hsiang-Yun Wu, Martin Nöllenburg, Ivan Viola
A Visual Comparison of Hand-Drawn and Machine-Generated Human Metabolic Pathways
Poster shown at EuroVis
( 4. June 2018- 8. June 2018)
[poster] |
Poster |
|
Katarína Furmanová, Jan Byska, Eduard Gröller, Ivan Viola, Jan J. Paleček, Barbora Kozlikova
COZOID: contact zone identifier for visual analysis of protein-protein interactions
BMC Bioinformatics, (19:125 ):1-25, April 2018. [image] [Paper] |
Journal Paper (without talk) |
|
Hsiang-Yun Wu, Martin Nöllenburg, Ivan Viola
The Travel of a Metabolite
submitted to PacificVis 2018 Data Story Telling Contest
[paper] [video] |
Miscellaneous Publication |
|
Thomas Bernhard Koch
Semantic Screen-Space Occlusion for Multiscale Molecular Visualization
[Bachelor Thesis] |
Bachelor Thesis |
|
Julian Strohmayer
A Visual Analytics Approach to Hypocotyl/Root Transition Detection in Arabidopsis Thaliana
[image] |
Bachelor Thesis |
|
Haichao Miao, Elisa De Llano, Johannes Sorger, Yasaman Ahmadi, Tadija Kekic, Tobias Isenberg, Eduard Gröller, Ivan Barisic, Ivan Viola
Multiscale Visualization and Scale-adaptive Modification of DNA Nanostructures
IEEE Transactions on Visualization and Computer Graphics, 24(1), January 2018. [paper] |
Journal Paper with Conference Talk |
|
Lukas Lipp
Visualization of Fiber Orientation in Glass Fiber Reinforced Polymers
[Bachelor Thesis] |
Bachelor Thesis |
|
Radu Jianu, Martin Krzywinski, Luana Micallef, Hsiang-Yun Wu
Mapifying the Genome, Scalable Set Visualizations (Dagstuhl Seminar 17332)
TR-193-02-2018-2, 2018 [paper] |
Technical Report |
|
Stefan Dietrich
Smart Visibility Technique for Linear and Planar Molecular Assemblies
|
Bachelor Thesis |