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C

checkForNodes(int, int, Canvas) - Method in class ConsensusTree
checks if there is a node at the position defined by x and y on the canvas.
checkRange(double, double, double) - Static method in class OurColormap
helping method for getColor, checks if an integer is between a given range
ComparisonTree - Class in <Unnamed>
 
ComparisonTree(Tree, Tree) - Constructor for class ComparisonTree
creates a comparison tree and calculates the score of each node using the consensus tree
ConsensusTree - Class in <Unnamed>
 
ConsensusTree(int, ArrayList<Tree>) - Constructor for class ConsensusTree
creates a consensus tree and calculates the score of each node
convertStreamToString(InputStream) - Method in class Parser
converts a filestream into a string
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